Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRBV6-7A0A0A0MS04 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV6-7A0A0A0MS04 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRBV6-7A0A0A0MS04 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-7A0A0A0MS04 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 LYSMD4-203ENST00000378904 2122 ntBASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.65□□□□□ -0.06
TRBV6-7A0A0A0MS04 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.65□□□□□ -0.07
TRBV6-7A0A0A0MS04 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC006449.5-201ENST00000610658 2098 ntBASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV6-7A0A0A0MS04 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 FAM8A6P-201ENST00000407496 1135 ntBASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 SLC25A3P1-201ENST00000443844 931 ntBASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 LINC01311-201ENST00000565162 1445 ntBASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV6-7A0A0A0MS04 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms