Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 KRT126P-201ENST00000549467 1181 ntBASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 AC011467.2-201ENST00000598425 242 ntBASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 AL591684.3-201ENST00000605187 298 ntBASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLCA3PQ9Y6N3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 AC008764.6-201ENST00000595909 2069 ntBASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 RCN1P2-201ENST00000398357 915 ntBASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 AL450487.1-201ENST00000426799 995 ntBASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 SLC25A6P5-201ENST00000435663 894 ntBASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 MIR5100-201ENST00000579544 119 ntBASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCA3PQ9Y6N3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 AC010460.3-201ENST00000511359 1579 ntBASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 BX276092.7-203ENST00000637198 1536 ntBASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 AC111152.3-201ENST00000569699 673 ntBASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 AL732292.2-201ENST00000609649 430 ntBASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 AL691432.3-201ENST00000621860 400 ntBASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCA3PQ9Y6N3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms