Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 AL049757.1-201ENST00000616842 1596 ntBASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.76■□□□□ 0.91
CYP46A1Q9Y6A2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 PCED1CP-201ENST00000419887 785 ntBASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 AC087388.1-201ENST00000571370 1112 ntBASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 AP005901.3-202ENST00000581653 237 ntBASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYP46A1Q9Y6A2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 TSSC2-201ENST00000450217 709 ntBASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 AC009533.2-201ENST00000543664 586 ntBASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 AL121761.2-201ENST00000598007 1648 ntBASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CYP46A1Q9Y6A2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 KRT8P10-201ENST00000450021 1447 ntBASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 AC111152.3-201ENST00000569699 673 ntBASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 KRT18P1-202ENST00000452408 1331 ntBASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYP46A1Q9Y6A2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms