Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AL645608.8-201ENST00000606034 2086 ntBASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 AC004817.3-201ENST00000602957 2129 ntBASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 BX005266.1-201ENST00000473402 457 ntBASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 RN7SL510P-201ENST00000581311 263 ntBASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHA4Q9UN74 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 AL023806.1-201ENST00000603994 1649 ntBASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 PRYP5-201ENST00000451909 266 ntBASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 SART3-203ENST00000546611 1184 ntBASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 AL691432.3-201ENST00000621860 400 ntBASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHA4Q9UN74 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 HTR7P1-202ENST00000624664 4411 ntBASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHA4Q9UN74 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 AL022326.1-202ENST00000641533 845 ntBASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA4Q9UN74 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms