Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 ELK2BP-201ENST00000415014 1224 ntBASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 ACTG1P4-201ENST00000425123 1122 ntBASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 AC145285.3-201ENST00000564603 959 ntBASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 AC106730.1-201ENST00000566722 1090 ntBASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 AC005593.1-201ENST00000624894 515 ntBASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 AC090340.1-201ENST00000620778 4980 ntBASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 LYSMD4-203ENST00000378904 2122 ntBASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN1Q9UMX0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 ZNF259P1-201ENST00000407656 1365 ntBASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 RNA5SP415-201ENST00000517246 115 ntBASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 AL353135.1-201ENST00000606729 504 ntBASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 AL135999.2-201ENST00000622438 1686 ntBASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN1Q9UMX0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 AC006504.4-201ENST00000592118 1568 ntBASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 UNC93B6-202ENST00000528242 690 ntBASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 AC104109.2-201ENST00000602919 1418 ntBASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN1Q9UMX0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 GNAS-203ENST00000306120 1878 ntBASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN1Q9UMX0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms