Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC005593.1-201ENST00000624894 515 ntBASIC18.79■□□□□ 0.6
CNTN3Q9P232 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CNTN3Q9P232 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CNTN3Q9P232 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 KRT18P58-201ENST00000527480 1120 ntBASIC18.78■□□□□ 0.6
CNTN3Q9P232 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CNTN3Q9P232 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 AL135999.2-201ENST00000622438 1686 ntBASIC18.78■□□□□ 0.6
CNTN3Q9P232 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CNTN3Q9P232 LYSMD4-203ENST00000378904 2122 ntBASIC18.77■□□□□ 0.6
CNTN3Q9P232 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNTN3Q9P232 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.77■□□□□ 0.6
CNTN3Q9P232 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.77■□□□□ 0.6
CNTN3Q9P232 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.77■□□□□ 0.6
CNTN3Q9P232 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNTN3Q9P232 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.77■□□□□ 0.6
CNTN3Q9P232 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.77■□□□□ 0.6
CNTN3Q9P232 AC009947.1-201ENST00000444350 727 ntBASIC18.77■□□□□ 0.6
CNTN3Q9P232 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNTN3Q9P232 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.77■□□□□ 0.6
CNTN3Q9P232 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.77■□□□□ 0.6
CNTN3Q9P232 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNTN3Q9P232 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CNTN3Q9P232 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.77■□□□□ 0.59
CNTN3Q9P232 GPR89P-201ENST00000407924 1495 ntBASIC18.77■□□□□ 0.59
CNTN3Q9P232 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNTN3Q9P232 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNTN3Q9P232 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNTN3Q9P232 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNTN3Q9P232 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTN3Q9P232 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.75■□□□□ 0.59
CNTN3Q9P232 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTN3Q9P232 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTN3Q9P232 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTN3Q9P232 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CNTN3Q9P232 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CNTN3Q9P232 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.75■□□□□ 0.59
CNTN3Q9P232 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.75■□□□□ 0.59
CNTN3Q9P232 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTN3Q9P232 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms