Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 KRT18P13-201ENST00000400056 1290 ntBASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 AC002558.1-201ENST00000488906 803 ntBASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 AP002469.2-201ENST00000531724 424 ntBASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 SLC25A6P4-201ENST00000586535 553 ntBASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CUEDC1Q9NWM3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 PMS2P1-201ENST00000431037 1228 ntBASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 AC103564.2-201ENST00000432853 1299 ntBASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 AC079781.3-201ENST00000449110 356 ntBASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 BX640515.1-201ENST00000617215 977 ntBASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 PP12613-201ENST00000424958 2230 ntBASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CUEDC1Q9NWM3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 AC132008.2-207ENST00000454517 770 ntBASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 AC079776.4-201ENST00000511039 504 ntBASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.91■□□□□ 0.3
CUEDC1Q9NWM3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms