Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 AC116353.5-201ENST00000638148 1699 ntBASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 AC104390.1-201ENST00000555663 520 ntBASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 CLEC4GP1-201ENST00000596555 870 ntBASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 AC141257.4-201ENST00000634557 245 ntBASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 AC136944.6-201ENST00000634818 245 ntBASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCM2LQ9NUG4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 AC005915.1-201ENST00000624912 2018 ntBASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCM2LQ9NUG4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms