Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 AL138966.2-201ENST00000621997 464 ntBASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 AL031432.5-201ENST00000641059 760 ntBASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 LINC02012-201ENST00000608206 1725 ntBASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 AC105020.1-201ENST00000435356 2205 ntBASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 FAM8A6P-201ENST00000407496 1135 ntBASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 AC096633.1-201ENST00000422446 749 ntBASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 AC002558.1-201ENST00000488906 803 ntBASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC42SE2Q9NRR3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 HLA-F-220ENST00000434407 884 ntBASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.05□□□□□ -0.48
CDC42SE2Q9NRR3 MTCL1P1-201ENST00000446207 792 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms