Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 Z99916.3-201ENST00000623422 1080 ntBASIC20.71■□□□□ 0.91
RTN4Q9NQC3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 AC022144.1-201ENST00000602255 1580 ntBASIC20.71■□□□□ 0.91
RTN4Q9NQC3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.71■□□□□ 0.91
RTN4Q9NQC3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RTN4Q9NQC3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 AC008556.1-201ENST00000610908 2040 ntBASIC20.7■□□□□ 0.9
RTN4Q9NQC3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 PRKY-204ENST00000533551 1019 ntBASIC20.7■□□□□ 0.9
RTN4Q9NQC3 AC142086.2-201ENST00000569753 217 ntBASIC20.7■□□□□ 0.9
RTN4Q9NQC3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 AL109923.1-201ENST00000618799 583 ntBASIC20.7■□□□□ 0.9
RTN4Q9NQC3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 HEIH-201ENST00000623091 1652 ntBASIC20.7■□□□□ 0.9
RTN4Q9NQC3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.7■□□□□ 0.9
RTN4Q9NQC3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 NORAD-201ENST00000565493 5339 ntBASIC20.69■□□□□ 0.9
RTN4Q9NQC3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 AC060766.1-201ENST00000590824 627 ntBASIC20.69■□□□□ 0.9
RTN4Q9NQC3 AC010326.4-201ENST00000604665 891 ntBASIC20.69■□□□□ 0.9
RTN4Q9NQC3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RTN4Q9NQC3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 RCC2P6-201ENST00000526625 1557 ntBASIC20.68■□□□□ 0.9
RTN4Q9NQC3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 AC006449.5-201ENST00000610658 2098 ntBASIC20.68■□□□□ 0.9
RTN4Q9NQC3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms