Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC40Q9H9A6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.78■□□□□ 0.44
LRRC40Q9H9A6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC40Q9H9A6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC40Q9H9A6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC40Q9H9A6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC40Q9H9A6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC40Q9H9A6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC40Q9H9A6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 AC111152.3-201ENST00000569699 673 ntBASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
LRRC40Q9H9A6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC40Q9H9A6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 AC009053.2-201ENST00000563701 2365 ntBASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 PCDHA12-202ENST00000613593 2588 ntBASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 AD000864.1-201ENST00000624076 2295 ntBASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 DRAXINP1-201ENST00000437611 948 ntBASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 AC091607.1-201ENST00000490318 1060 ntBASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 AP005901.3-202ENST00000581653 237 ntBASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 Z69720.1-201ENST00000601483 472 ntBASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 AC233702.3-201ENST00000578656 1387 ntBASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC40Q9H9A6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 AL049757.1-201ENST00000616842 1596 ntBASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC40Q9H9A6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms