Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 AC002056.1-201ENST00000395613 760 ntBASIC19.01■□□□□ 0.63
HIPK3Q9H422 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 AC093214.1-201ENST00000511688 1107 ntBASIC19.01■□□□□ 0.63
HIPK3Q9H422 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 AC190387.1-201ENST00000551683 408 ntBASIC19.01■□□□□ 0.63
HIPK3Q9H422 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 AL390955.2-201ENST00000603032 514 ntBASIC19.01■□□□□ 0.63
HIPK3Q9H422 Z92544.3-201ENST00000624747 417 ntBASIC19.01■□□□□ 0.63
HIPK3Q9H422 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIPK3Q9H422 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.01■□□□□ 0.63
HIPK3Q9H422 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
HIPK3Q9H422 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19■□□□□ 0.63
HIPK3Q9H422 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19■□□□□ 0.63
HIPK3Q9H422 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19■□□□□ 0.63
HIPK3Q9H422 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 PMS2P4-201ENST00000412466 1052 ntBASIC19■□□□□ 0.63
HIPK3Q9H422 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19■□□□□ 0.63
HIPK3Q9H422 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19■□□□□ 0.63
HIPK3Q9H422 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19■□□□□ 0.63
HIPK3Q9H422 DUX4L27-201ENST00000554796 1261 ntBASIC19■□□□□ 0.63
HIPK3Q9H422 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19■□□□□ 0.63
HIPK3Q9H422 AC026120.1-201ENST00000611536 926 ntBASIC19■□□□□ 0.63
HIPK3Q9H422 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19■□□□□ 0.63
HIPK3Q9H422 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HIPK3Q9H422 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
HIPK3Q9H422 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIPK3Q9H422 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19■□□□□ 0.63
HIPK3Q9H422 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HIPK3Q9H422 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19■□□□□ 0.63
HIPK3Q9H422 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19■□□□□ 0.63
HIPK3Q9H422 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HIPK3Q9H422 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.99■□□□□ 0.63
HIPK3Q9H422 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms