Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NKX6-2Q9C056 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.21□□□□□ -0.14
NKX6-2Q9C056 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NKX6-2Q9C056 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NKX6-2Q9C056 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NKX6-2Q9C056 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NKX6-2Q9C056 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NKX6-2Q9C056 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
NKX6-2Q9C056 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NKX6-2Q9C056 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 KRT18P41-201ENST00000518924 1277 ntBASIC14.2□□□□□ -0.14
NKX6-2Q9C056 AL121832.2-201ENST00000610979 668 ntBASIC14.2□□□□□ -0.14
NKX6-2Q9C056 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NKX6-2Q9C056 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 AF201337.1-201ENST00000520239 748 ntBASIC14.19□□□□□ -0.14
NKX6-2Q9C056 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 AC120498.8-201ENST00000614275 531 ntBASIC14.19□□□□□ -0.14
NKX6-2Q9C056 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms