Protein–RNA interactions for Protein: Q9BYG3

NIFK, MKI67 FHA domain-interacting nucleolar phosphoprotein, humanhuman

Known RBP Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKQ9BYG3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NIFKQ9BYG3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.18■□□□□ 0.66
NIFKQ9BYG3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NIFKQ9BYG3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NIFKQ9BYG3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NIFKQ9BYG3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.18■□□□□ 0.66
NIFKQ9BYG3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 AC007967.2-201ENST00000432613 625 ntBASIC19.17■□□□□ 0.66
NIFKQ9BYG3 VN2R19P-201ENST00000442399 1052 ntBASIC19.17■□□□□ 0.66
NIFKQ9BYG3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.17■□□□□ 0.66
NIFKQ9BYG3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 AC007613.1-201ENST00000572811 2597 ntBASIC19.16■□□□□ 0.66
NIFKQ9BYG3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 CRYGEP-201ENST00000412192 528 ntBASIC19.16■□□□□ 0.66
NIFKQ9BYG3 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.16■□□□□ 0.66
NIFKQ9BYG3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 AC064836.3-201ENST00000607928 673 ntBASIC19.16■□□□□ 0.66
NIFKQ9BYG3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NIFKQ9BYG3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 AL138688.1-201ENST00000624851 1594 ntBASIC19.15■□□□□ 0.66
NIFKQ9BYG3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 MRPL20P1-201ENST00000400819 433 ntBASIC19.15■□□□□ 0.66
NIFKQ9BYG3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 KRT18P2-201ENST00000447938 1258 ntBASIC19.15■□□□□ 0.66
NIFKQ9BYG3 HCG4B-203ENST00000450128 991 ntBASIC19.15■□□□□ 0.66
NIFKQ9BYG3 PAWRP1-201ENST00000451083 565 ntBASIC19.15■□□□□ 0.66
NIFKQ9BYG3 RNA5SP416-201ENST00000516838 111 ntBASIC19.15■□□□□ 0.66
NIFKQ9BYG3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 OR7E47P-204ENST00000575924 449 ntBASIC19.15■□□□□ 0.66
NIFKQ9BYG3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 AC016396.2-201ENST00000562575 1417 ntBASIC19.15■□□□□ 0.66
NIFKQ9BYG3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.15■□□□□ 0.66
NIFKQ9BYG3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms