Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.21■□□□□ 0.99
CRAMP1Q96RY5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CRAMP1Q96RY5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.2■□□□□ 0.99
CRAMP1Q96RY5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CRAMP1Q96RY5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 TFAMP1-201ENST00000412727 736 ntBASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 RNA5SP421-201ENST00000516864 134 ntBASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 AC239800.4-201ENST00000603712 296 ntBASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 AJ011932.1-201ENST00000621707 465 ntBASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CRAMP1Q96RY5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 RN7SL589P-201ENST00000481268 310 ntBASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 AC051619.7-201ENST00000568314 623 ntBASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 MIR4515-201ENST00000584082 81 ntBASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 LINC01451-201ENST00000623792 534 ntBASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 AKAP8P1-201ENST00000434743 1349 ntBASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CRAMP1Q96RY5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 FAM58DP-201ENST00000428076 619 ntBASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CRAMP1Q96RY5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms