Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC85AQ96PX6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 AC004832.2-201ENST00000426397 482 ntBASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 VN2R19P-201ENST00000442399 1052 ntBASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 MIR3687-2-201ENST00000577708 61 ntBASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 MIR3687-1-201ENST00000614492 61 ntBASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC85AQ96PX6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 AL353135.1-201ENST00000606729 504 ntBASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC85AQ96PX6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 HCG4B-203ENST00000450128 991 ntBASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 AC134684.3-201ENST00000641758 218 ntBASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 NEFHP1-201ENST00000412845 2629 ntBASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC85AQ96PX6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
CCDC85AQ96PX6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CCDC85AQ96PX6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC85AQ96PX6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CCDC85AQ96PX6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC85AQ96PX6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.64■■□□□ 1.06
CCDC85AQ96PX6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 IGLL3P-201ENST00000412472 434 ntBASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 DNAJB3-201ENST00000446806 729 ntBASIC21.64■■□□□ 1.05
CCDC85AQ96PX6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms