Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 AC092865.5-201ENST00000545435 363 ntBASIC17.41■□□□□ 0.38
ARRDC3Q96B67 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 AC064836.3-201ENST00000607928 673 ntBASIC17.41■□□□□ 0.38
ARRDC3Q96B67 AC004790.2-201ENST00000623588 572 ntBASIC17.41■□□□□ 0.38
ARRDC3Q96B67 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 LYSMD4-203ENST00000378904 2122 ntBASIC17.41■□□□□ 0.38
ARRDC3Q96B67 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.41■□□□□ 0.38
ARRDC3Q96B67 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 AL590787.1-201ENST00000568856 1315 ntBASIC17.4■□□□□ 0.38
ARRDC3Q96B67 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARRDC3Q96B67 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.38
ARRDC3Q96B67 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
ARRDC3Q96B67 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ARRDC3Q96B67 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 KRT18P2-201ENST00000447938 1258 ntBASIC17.39■□□□□ 0.37
ARRDC3Q96B67 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 RNA5SP416-201ENST00000516838 111 ntBASIC17.39■□□□□ 0.37
ARRDC3Q96B67 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 MIR4751-201ENST00000578027 74 ntBASIC17.39■□□□□ 0.37
ARRDC3Q96B67 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ARRDC3Q96B67 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.38■□□□□ 0.37
ARRDC3Q96B67 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ARRDC3Q96B67 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ARRDC3Q96B67 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ARRDC3Q96B67 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ARRDC3Q96B67 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ARRDC3Q96B67 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.38■□□□□ 0.37
ARRDC3Q96B67 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ARRDC3Q96B67 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms