Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 AL356309.3-201ENST00000624132 1934 ntBASIC16.84■□□□□ 0.29
VPS33AQ96AX1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 AP006294.2-201ENST00000641667 209 ntBASIC16.84■□□□□ 0.29
VPS33AQ96AX1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 KRT89P-201ENST00000620027 1478 ntBASIC16.84■□□□□ 0.29
VPS33AQ96AX1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.83■□□□□ 0.29
VPS33AQ96AX1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.83■□□□□ 0.29
VPS33AQ96AX1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
VPS33AQ96AX1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
VPS33AQ96AX1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 AC105020.1-201ENST00000435356 2205 ntBASIC16.83■□□□□ 0.28
VPS33AQ96AX1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 AC016396.2-201ENST00000562575 1417 ntBASIC16.83■□□□□ 0.28
VPS33AQ96AX1 PCDHB19P-201ENST00000570871 2371 ntBASIC16.83■□□□□ 0.28
VPS33AQ96AX1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 AC004263.2-201ENST00000617183 678 ntBASIC16.83■□□□□ 0.28
VPS33AQ96AX1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 AC079602.3-201ENST00000623931 403 ntBASIC16.83■□□□□ 0.28
VPS33AQ96AX1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS33AQ96AX1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 BX276092.7-203ENST00000637198 1536 ntBASIC16.82■□□□□ 0.28
VPS33AQ96AX1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 AC141257.4-201ENST00000634557 245 ntBASIC16.82■□□□□ 0.28
VPS33AQ96AX1 AC136944.6-201ENST00000634818 245 ntBASIC16.82■□□□□ 0.28
VPS33AQ96AX1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS33AQ96AX1 FLJ38576-201ENST00000623820 2459 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms