Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.38■□□□□ 0.69
HPS3Q969F9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.38■□□□□ 0.69
HPS3Q969F9 AC138894.3-201ENST00000603787 634 ntBASIC19.38■□□□□ 0.69
HPS3Q969F9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
HPS3Q969F9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.38■□□□□ 0.69
HPS3Q969F9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HPS3Q969F9 AC132938.5-201ENST00000624980 1813 ntBASIC19.38■□□□□ 0.69
HPS3Q969F9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS3Q969F9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS3Q969F9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HPS3Q969F9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS3Q969F9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS3Q969F9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HPS3Q969F9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.37■□□□□ 0.69
HPS3Q969F9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HPS3Q969F9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HPS3Q969F9 NUS1P2-201ENST00000417358 873 ntBASIC19.37■□□□□ 0.69
HPS3Q969F9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS3Q969F9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.37■□□□□ 0.69
HPS3Q969F9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.37■□□□□ 0.69
HPS3Q969F9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
HPS3Q969F9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.37■□□□□ 0.69
HPS3Q969F9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HPS3Q969F9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS3Q969F9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS3Q969F9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.37■□□□□ 0.69
HPS3Q969F9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HPS3Q969F9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HPS3Q969F9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPS3Q969F9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HPS3Q969F9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HPS3Q969F9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HPS3Q969F9 AL353593.2-201ENST00000602529 1483 ntBASIC19.36■□□□□ 0.69
HPS3Q969F9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS3Q969F9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS3Q969F9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS3Q969F9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.36■□□□□ 0.69
HPS3Q969F9 SLC25A1P3-201ENST00000395415 828 ntBASIC19.36■□□□□ 0.69
HPS3Q969F9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HPS3Q969F9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HPS3Q969F9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HPS3Q969F9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.36■□□□□ 0.69
HPS3Q969F9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HPS3Q969F9 IGHV3-52-201ENST00000519770 353 ntBASIC19.36■□□□□ 0.69
HPS3Q969F9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.36■□□□□ 0.69
HPS3Q969F9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.36■□□□□ 0.69
HPS3Q969F9 STK25P1-201ENST00000585406 838 ntBASIC19.36■□□□□ 0.69
HPS3Q969F9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS3Q969F9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HPS3Q969F9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.36■□□□□ 0.69
HPS3Q969F9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS3Q969F9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
HPS3Q969F9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HPS3Q969F9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HPS3Q969F9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HPS3Q969F9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.35■□□□□ 0.69
HPS3Q969F9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HPS3Q969F9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.35■□□□□ 0.69
HPS3Q969F9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HPS3Q969F9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.35■□□□□ 0.69
HPS3Q969F9 HCG4P8-203ENST00000443049 980 ntBASIC19.35■□□□□ 0.69
HPS3Q969F9 FOSL1P1-201ENST00000511041 816 ntBASIC19.35■□□□□ 0.69
HPS3Q969F9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.35■□□□□ 0.69
HPS3Q969F9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 AC114341.1-201ENST00000618070 349 ntBASIC19.35■□□□□ 0.69
HPS3Q969F9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.35■□□□□ 0.69
HPS3Q969F9 AD001527.2-201ENST00000622994 785 ntBASIC19.35■□□□□ 0.69
HPS3Q969F9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.35■□□□□ 0.69
HPS3Q969F9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HPS3Q969F9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.35■□□□□ 0.69
HPS3Q969F9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HPS3Q969F9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms