Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 RCN1P1-201ENST00000400413 996 ntBASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 HOMER2P1-201ENST00000455653 964 ntBASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTN4IP1Q8WWV3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 SPDYE15P-201ENST00000424157 909 ntBASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 RN7SL850P-201ENST00000579959 291 ntBASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RTN4IP1Q8WWV3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RTN4IP1Q8WWV3 FAM8A6P-201ENST00000407496 1135 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms