Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 AC008267.7-201ENST00000624570 1194 ntBASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CHMP7Q8WUX9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 AC109635.5-201ENST00000533593 962 ntBASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC28.05■■■□□ 2.08
CHMP7Q8WUX9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHMP7Q8WUX9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 AC138969.3-201ENST00000546612 1459 ntBASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 AC138932.2-201ENST00000548268 1459 ntBASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 AC126755.4-201ENST00000549796 1459 ntBASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 GIMAP3P-201ENST00000495150 836 ntBASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 AC017083.2-201ENST00000608069 979 ntBASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
CHMP7Q8WUX9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 WASH6P-202ENST00000359512 1437 ntBASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 AC027307.2-201ENST00000591252 911 ntBASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 SPDYE12P-201ENST00000618416 771 ntBASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHMP7Q8WUX9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC28.01■■■□□ 2.08
CHMP7Q8WUX9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC28.01■■■□□ 2.08
CHMP7Q8WUX9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC28.01■■■□□ 2.07
CHMP7Q8WUX9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CHMP7Q8WUX9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
CHMP7Q8WUX9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC28■■■□□ 2.07
CHMP7Q8WUX9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC28■■■□□ 2.07
CHMP7Q8WUX9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC28■■■□□ 2.07
CHMP7Q8WUX9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
CHMP7Q8WUX9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC28■■■□□ 2.07
CHMP7Q8WUX9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC28■■■□□ 2.07
CHMP7Q8WUX9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC28■■■□□ 2.07
CHMP7Q8WUX9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC28■■■□□ 2.07
CHMP7Q8WUX9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
CHMP7Q8WUX9 MIR1909-201ENST00000411312 80 ntBASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms