Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CT55Q8WUE5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CT55Q8WUE5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CT55Q8WUE5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 AC074386.1-202ENST00000463561 864 ntBASIC16.22■□□□□ 0.19
CT55Q8WUE5 CXCL1P1-201ENST00000502804 216 ntBASIC16.22■□□□□ 0.19
CT55Q8WUE5 AL031432.2-201ENST00000566714 459 ntBASIC16.22■□□□□ 0.19
CT55Q8WUE5 AL928711.1-201ENST00000570165 459 ntBASIC16.22■□□□□ 0.19
CT55Q8WUE5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CT55Q8WUE5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CT55Q8WUE5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CT55Q8WUE5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CT55Q8WUE5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CT55Q8WUE5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CT55Q8WUE5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.22■□□□□ 0.19
CT55Q8WUE5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.21■□□□□ 0.19
CT55Q8WUE5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 AC009113.1-201ENST00000570267 2443 ntBASIC16.21■□□□□ 0.19
CT55Q8WUE5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.21■□□□□ 0.19
CT55Q8WUE5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CT55Q8WUE5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
CT55Q8WUE5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CT55Q8WUE5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.21■□□□□ 0.18
CT55Q8WUE5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CT55Q8WUE5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.21■□□□□ 0.18
CT55Q8WUE5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CT55Q8WUE5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CT55Q8WUE5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CT55Q8WUE5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CT55Q8WUE5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms