Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 AL022342.1-201ENST00000400363 863 ntBASIC17.59■□□□□ 0.41
CHD5Q8TDI0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 AC008667.4-201ENST00000607370 168 ntBASIC17.59■□□□□ 0.41
CHD5Q8TDI0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD5Q8TDI0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHD5Q8TDI0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD5Q8TDI0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHD5Q8TDI0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CHD5Q8TDI0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHD5Q8TDI0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHD5Q8TDI0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 AC092910.1-201ENST00000482027 1129 ntBASIC17.58■□□□□ 0.4
CHD5Q8TDI0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 AF228730.7-201ENST00000641842 219 ntBASIC17.58■□□□□ 0.4
CHD5Q8TDI0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHD5Q8TDI0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 LINC00982-205ENST00000420957 435 ntBASIC17.57■□□□□ 0.4
CHD5Q8TDI0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 AC108751.1-201ENST00000490852 363 ntBASIC17.57■□□□□ 0.4
CHD5Q8TDI0 AC124947.2-201ENST00000547118 1133 ntBASIC17.57■□□□□ 0.4
CHD5Q8TDI0 TERC-201ENST00000602385 541 ntBASIC17.57■□□□□ 0.4
CHD5Q8TDI0 PGM5P2-202ENST00000637225 1043 ntBASIC17.57■□□□□ 0.4
CHD5Q8TDI0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 AC093525.9-201ENST00000624961 1746 ntBASIC17.57■□□□□ 0.4
CHD5Q8TDI0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 AC116407.3-201ENST00000623905 1129 ntBASIC17.57■□□□□ 0.4
CHD5Q8TDI0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.57■□□□□ 0.4
CHD5Q8TDI0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 AC108860.2-201ENST00000562760 2183 ntBASIC17.56■□□□□ 0.4
CHD5Q8TDI0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 Z83851.2-201ENST00000609564 659 ntBASIC17.56■□□□□ 0.4
CHD5Q8TDI0 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.56■□□□□ 0.4
CHD5Q8TDI0 FAM215A-202ENST00000632077 792 ntBASIC17.56■□□□□ 0.4
CHD5Q8TDI0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 FRMD8P1-201ENST00000440433 1524 ntBASIC17.56■□□□□ 0.4
CHD5Q8TDI0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHD5Q8TDI0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms