Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 COX5BP2-201ENST00000392354 334 ntBASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 TSPY7P-201ENST00000431358 1114 ntBASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 ECEL1P2-202ENST00000465689 757 ntBASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 AL136038.4-201ENST00000603606 1261 ntBASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC01561Q8N1V8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 AL391807.1-203ENST00000604392 2365 ntBASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 INGX-201ENST00000359239 846 ntBASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 AC004263.2-201ENST00000617183 678 ntBASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 AC010947.1-201ENST00000623454 693 ntBASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.76□□□□□ -0.53
LINC01561Q8N1V8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms