Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 TP73-AS1-210ENST00000637775 1455 ntBASIC16.91■□□□□ 0.3
KRT78Q8N1N4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT78Q8N1N4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 POM121L3P-201ENST00000419331 1163 ntBASIC16.9■□□□□ 0.3
KRT78Q8N1N4 IGHV3-47-201ENST00000425060 335 ntBASIC16.9■□□□□ 0.3
KRT78Q8N1N4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 AC096582.2-201ENST00000510860 516 ntBASIC16.9■□□□□ 0.3
KRT78Q8N1N4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 AC109462.3-201ENST00000573934 613 ntBASIC16.9■□□□□ 0.3
KRT78Q8N1N4 AL139327.4-201ENST00000612362 153 ntBASIC16.9■□□□□ 0.3
KRT78Q8N1N4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
KRT78Q8N1N4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.89■□□□□ 0.3
KRT78Q8N1N4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.89■□□□□ 0.3
KRT78Q8N1N4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.89■□□□□ 0.3
KRT78Q8N1N4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
KRT78Q8N1N4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT78Q8N1N4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms