Protein–RNA interactions for Protein: Q8N119

MMP21, Matrix metalloproteinase-21, humanhuman

Predictions only

Length 569 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP21Q8N119 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP21Q8N119 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP21Q8N119 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP21Q8N119 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.62■□□□□ 0.25
MMP21Q8N119 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP21Q8N119 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MMP21Q8N119 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP21Q8N119 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP21Q8N119 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.62■□□□□ 0.25
MMP21Q8N119 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 AL139327.4-201ENST00000612362 153 ntBASIC16.62■□□□□ 0.25
MMP21Q8N119 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP21Q8N119 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP21Q8N119 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP21Q8N119 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MMP21Q8N119 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP21Q8N119 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP21Q8N119 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 NSUN5P1-202ENST00000421140 1535 ntBASIC16.61■□□□□ 0.25
MMP21Q8N119 NSUN5P2-203ENST00000457352 1529 ntBASIC16.61■□□□□ 0.25
MMP21Q8N119 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
MMP21Q8N119 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 AL049757.1-201ENST00000616842 1596 ntBASIC16.61■□□□□ 0.25
MMP21Q8N119 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP21Q8N119 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MMP21Q8N119 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MMP21Q8N119 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
MMP21Q8N119 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MMP21Q8N119 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
MMP21Q8N119 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 KRT17P6-201ENST00000453795 1220 ntBASIC16.61■□□□□ 0.25
MMP21Q8N119 AP000867.3-201ENST00000524675 377 ntBASIC16.61■□□□□ 0.25
MMP21Q8N119 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.61■□□□□ 0.25
MMP21Q8N119 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP21Q8N119 BNIP3P18-201ENST00000593976 575 ntBASIC16.61■□□□□ 0.25
MMP21Q8N119 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP21Q8N119 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP21Q8N119 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP21Q8N119 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MMP21Q8N119 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MMP21Q8N119 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 KRT8P10-201ENST00000450021 1447 ntBASIC16.61■□□□□ 0.25
MMP21Q8N119 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MMP21Q8N119 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP21Q8N119 TP73-AS1-210ENST00000637775 1455 ntBASIC16.61■□□□□ 0.25
MMP21Q8N119 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP21Q8N119 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.6■□□□□ 0.25
MMP21Q8N119 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP21Q8N119 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.6■□□□□ 0.25
MMP21Q8N119 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP21Q8N119 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.6■□□□□ 0.25
MMP21Q8N119 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP21Q8N119 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
MMP21Q8N119 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MMP21Q8N119 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MMP21Q8N119 IGHV3-47-201ENST00000425060 335 ntBASIC16.6■□□□□ 0.25
MMP21Q8N119 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms