Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 EMBP1-201ENST00000458200 901 ntBASIC17.22■□□□□ 0.35
SYVN1Q86TM6 AL592071.1-201ENST00000611956 408 ntBASIC17.22■□□□□ 0.35
SYVN1Q86TM6 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.22■□□□□ 0.35
SYVN1Q86TM6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SYVN1Q86TM6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SYVN1Q86TM6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.21■□□□□ 0.34
SYVN1Q86TM6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SYVN1Q86TM6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.21■□□□□ 0.34
SYVN1Q86TM6 AD000864.1-201ENST00000624076 2295 ntBASIC17.21■□□□□ 0.34
SYVN1Q86TM6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 AL353692.3-201ENST00000407031 1396 ntBASIC17.2■□□□□ 0.34
SYVN1Q86TM6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 AC099336.1-202ENST00000602961 463 ntBASIC17.2■□□□□ 0.34
SYVN1Q86TM6 AC138894.3-201ENST00000603787 634 ntBASIC17.2■□□□□ 0.34
SYVN1Q86TM6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 AC124864.1-201ENST00000623408 392 ntBASIC17.2■□□□□ 0.34
SYVN1Q86TM6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYVN1Q86TM6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYVN1Q86TM6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.19■□□□□ 0.34
SYVN1Q86TM6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.19■□□□□ 0.34
SYVN1Q86TM6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYVN1Q86TM6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYVN1Q86TM6 AC099398.1-201ENST00000567919 2776 ntBASIC17.19■□□□□ 0.34
SYVN1Q86TM6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYVN1Q86TM6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SYVN1Q86TM6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SYVN1Q86TM6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms