Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.43■□□□□ 0.86
USP50Q70EL3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
USP50Q70EL3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP50Q70EL3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP50Q70EL3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP50Q70EL3 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.43■□□□□ 0.86
USP50Q70EL3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
USP50Q70EL3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
USP50Q70EL3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP50Q70EL3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
USP50Q70EL3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.43■□□□□ 0.86
USP50Q70EL3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.43■□□□□ 0.86
USP50Q70EL3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.43■□□□□ 0.86
USP50Q70EL3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.43■□□□□ 0.86
USP50Q70EL3 AC004233.3-201ENST00000607794 1269 ntBASIC20.43■□□□□ 0.86
USP50Q70EL3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
USP50Q70EL3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP50Q70EL3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.43■□□□□ 0.86
USP50Q70EL3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP50Q70EL3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.43■□□□□ 0.86
USP50Q70EL3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP50Q70EL3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
USP50Q70EL3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 AC046185.3-201ENST00000623228 1824 ntBASIC20.42■□□□□ 0.86
USP50Q70EL3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 AC093677.2-201ENST00000600169 1863 ntBASIC20.42■□□□□ 0.86
USP50Q70EL3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.42■□□□□ 0.86
USP50Q70EL3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.42■□□□□ 0.86
USP50Q70EL3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.42■□□□□ 0.86
USP50Q70EL3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.42■□□□□ 0.86
USP50Q70EL3 AC109635.5-201ENST00000533593 962 ntBASIC20.42■□□□□ 0.86
USP50Q70EL3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.42■□□□□ 0.86
USP50Q70EL3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
USP50Q70EL3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.42■□□□□ 0.86
USP50Q70EL3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP50Q70EL3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.42■□□□□ 0.86
USP50Q70EL3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.42■□□□□ 0.86
USP50Q70EL3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP50Q70EL3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.41■□□□□ 0.86
USP50Q70EL3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
USP50Q70EL3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
USP50Q70EL3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
USP50Q70EL3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.41■□□□□ 0.86
USP50Q70EL3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.41■□□□□ 0.86
USP50Q70EL3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.41■□□□□ 0.86
USP50Q70EL3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.41■□□□□ 0.86
USP50Q70EL3 AL590560.3-201ENST00000623350 461 ntBASIC20.41■□□□□ 0.86
USP50Q70EL3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 AC100757.3-201ENST00000622361 1406 ntBASIC20.41■□□□□ 0.86
USP50Q70EL3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP50Q70EL3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
USP50Q70EL3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
USP50Q70EL3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 MIR346-201ENST00000362234 95 ntBASIC20.4■□□□□ 0.86
USP50Q70EL3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
USP50Q70EL3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.4■□□□□ 0.86
USP50Q70EL3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
USP50Q70EL3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.4■□□□□ 0.86
USP50Q70EL3 TSSK5P-201ENST00000423978 907 ntBASIC20.4■□□□□ 0.86
USP50Q70EL3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.4■□□□□ 0.86
USP50Q70EL3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.4■□□□□ 0.86
USP50Q70EL3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.4■□□□□ 0.86
USP50Q70EL3 AC027369.6-201ENST00000525520 931 ntBASIC20.4■□□□□ 0.86
USP50Q70EL3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
USP50Q70EL3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 AC005412.3-201ENST00000580309 715 ntBASIC20.4■□□□□ 0.86
USP50Q70EL3 MIR4453-201ENST00000584019 89 ntBASIC20.4■□□□□ 0.86
USP50Q70EL3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP50Q70EL3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms