Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 ANKRD19P-201ENST00000338192 862 ntBASIC16.79■□□□□ 0.28
RIF1Q5UIP0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 SPCS2P4-201ENST00000436160 681 ntBASIC16.79■□□□□ 0.28
RIF1Q5UIP0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 STK25P1-201ENST00000585406 838 ntBASIC16.79■□□□□ 0.28
RIF1Q5UIP0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RIF1Q5UIP0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 AL009183.1-201ENST00000603760 355 ntBASIC16.78■□□□□ 0.28
RIF1Q5UIP0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 TTTY23B-201ENST00000442790 549 ntBASIC16.78■□□□□ 0.28
RIF1Q5UIP0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 AC008494.3-201ENST00000606615 944 ntBASIC16.78■□□□□ 0.28
RIF1Q5UIP0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RIF1Q5UIP0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms