Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFX4Q33E94 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RFX4Q33E94 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.3■□□□□ 0.2
RFX4Q33E94 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.3■□□□□ 0.2
RFX4Q33E94 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.3■□□□□ 0.2
RFX4Q33E94 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 KRT17P2-201ENST00000300992 1314 ntBASIC16.3■□□□□ 0.2
RFX4Q33E94 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RFX4Q33E94 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.3■□□□□ 0.2
RFX4Q33E94 SEC1P-202ENST00000473944 940 ntBASIC16.3■□□□□ 0.2
RFX4Q33E94 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RFX4Q33E94 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.3■□□□□ 0.2
RFX4Q33E94 AC128688.1-201ENST00000487626 519 ntBASIC16.3■□□□□ 0.2
RFX4Q33E94 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.3■□□□□ 0.2
RFX4Q33E94 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFX4Q33E94 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.3■□□□□ 0.2
RFX4Q33E94 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RFX4Q33E94 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX4Q33E94 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RFX4Q33E94 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
RFX4Q33E94 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX4Q33E94 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 INGX-201ENST00000359239 846 ntBASIC16.29■□□□□ 0.2
RFX4Q33E94 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
RFX4Q33E94 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RFX4Q33E94 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.29■□□□□ 0.2
RFX4Q33E94 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX4Q33E94 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 AC024243.1-201ENST00000609234 778 ntBASIC16.29■□□□□ 0.2
RFX4Q33E94 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX4Q33E94 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX4Q33E94 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX4Q33E94 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX4Q33E94 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX4Q33E94 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 LINC00167-201ENST00000530583 1419 ntBASIC16.28■□□□□ 0.2
RFX4Q33E94 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX4Q33E94 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RFX4Q33E94 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RFX4Q33E94 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RFX4Q33E94 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.28■□□□□ 0.2
RFX4Q33E94 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 AC005915.1-201ENST00000624912 2018 ntBASIC16.28■□□□□ 0.2
RFX4Q33E94 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
RFX4Q33E94 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX4Q33E94 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.28■□□□□ 0.2
RFX4Q33E94 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX4Q33E94 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.28■□□□□ 0.2
RFX4Q33E94 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.28■□□□□ 0.2
RFX4Q33E94 AL355075.4-201ENST00000554988 638 ntBASIC16.28■□□□□ 0.2
RFX4Q33E94 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX4Q33E94 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RFX4Q33E94 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.28■□□□□ 0.2
RFX4Q33E94 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX4Q33E94 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX4Q33E94 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms