Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 YBX1P5-201ENST00000509441 847 ntBASIC20.85■□□□□ 0.93
PDS5AQ29RF7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 PDPK2P-202ENST00000562415 1191 ntBASIC20.85■□□□□ 0.93
PDS5AQ29RF7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 AC092865.6-201ENST00000642101 219 ntBASIC20.85■□□□□ 0.93
PDS5AQ29RF7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 AC087163.2-201ENST00000457299 853 ntBASIC20.84■□□□□ 0.93
PDS5AQ29RF7 AC112482.1-201ENST00000492080 688 ntBASIC20.84■□□□□ 0.93
PDS5AQ29RF7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 AC018845.2-201ENST00000568326 409 ntBASIC20.84■□□□□ 0.93
PDS5AQ29RF7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.84■□□□□ 0.93
PDS5AQ29RF7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 MIR3687-2-201ENST00000577708 61 ntBASIC20.83■□□□□ 0.93
PDS5AQ29RF7 MIR3687-1-201ENST00000614492 61 ntBASIC20.83■□□□□ 0.93
PDS5AQ29RF7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 AL513190.1-201ENST00000621254 727 ntBASIC20.83■□□□□ 0.93
PDS5AQ29RF7 AC055717.3-201ENST00000622967 595 ntBASIC20.83■□□□□ 0.93
PDS5AQ29RF7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.83■□□□□ 0.93
PDS5AQ29RF7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
PDS5AQ29RF7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDS5AQ29RF7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDS5AQ29RF7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDS5AQ29RF7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDS5AQ29RF7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 SLC25A6P2-201ENST00000497974 877 ntBASIC20.82■□□□□ 0.92
PDS5AQ29RF7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.82■□□□□ 0.92
PDS5AQ29RF7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.81■□□□□ 0.92
PDS5AQ29RF7 FAM185BP-201ENST00000443595 716 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms