Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CDH17Q12864 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CDH17Q12864 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH17Q12864 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDH17Q12864 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH17Q12864 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDH17Q12864 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 Z69720.1-201ENST00000601483 472 ntBASIC17.68■□□□□ 0.42
CDH17Q12864 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH17Q12864 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDH17Q12864 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH17Q12864 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CDH17Q12864 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH17Q12864 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH17Q12864 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDH17Q12864 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 AC233702.3-201ENST00000578656 1387 ntBASIC17.67■□□□□ 0.42
CDH17Q12864 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDH17Q12864 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.67■□□□□ 0.42
CDH17Q12864 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.67■□□□□ 0.42
CDH17Q12864 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.67■□□□□ 0.42
CDH17Q12864 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH17Q12864 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.67■□□□□ 0.42
CDH17Q12864 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.67■□□□□ 0.42
CDH17Q12864 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH17Q12864 TPSP2-201ENST00000561760 610 ntBASIC17.67■□□□□ 0.42
CDH17Q12864 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.67■□□□□ 0.42
CDH17Q12864 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.67■□□□□ 0.42
CDH17Q12864 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.67■□□□□ 0.42
CDH17Q12864 AP000550.4-202ENST00000639755 178 ntBASIC17.67■□□□□ 0.42
CDH17Q12864 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH17Q12864 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH17Q12864 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH17Q12864 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH17Q12864 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH17Q12864 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH17Q12864 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH17Q12864 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH17Q12864 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH17Q12864 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH17Q12864 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH17Q12864 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms