Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL391005.1-201ENST00000623953 2435 ntBASIC16.07■□□□□ 0.16
CLDN20P56880 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 NUS1P2-201ENST00000417358 873 ntBASIC16.07■□□□□ 0.16
CLDN20P56880 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN20P56880 AC096582.2-201ENST00000510860 516 ntBASIC16.07■□□□□ 0.16
CLDN20P56880 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN20P56880 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN20P56880 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLDN20P56880 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN20P56880 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN20P56880 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLDN20P56880 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN20P56880 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN20P56880 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN20P56880 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLDN20P56880 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN20P56880 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLDN20P56880 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLDN20P56880 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 TSPY19P-201ENST00000418461 509 ntBASIC16.06■□□□□ 0.16
CLDN20P56880 TSPY18P-201ENST00000441642 509 ntBASIC16.06■□□□□ 0.16
CLDN20P56880 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDN20P56880 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDN20P56880 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.06■□□□□ 0.16
CLDN20P56880 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.06■□□□□ 0.16
CLDN20P56880 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.06■□□□□ 0.16
CLDN20P56880 AL121772.3-201ENST00000610840 674 ntBASIC16.06■□□□□ 0.16
CLDN20P56880 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CLDN20P56880 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLDN20P56880 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLDN20P56880 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.06■□□□□ 0.16
CLDN20P56880 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLDN20P56880 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN20P56880 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CLDN20P56880 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLDN20P56880 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 FLJ13224-201ENST00000313737 1514 ntBASIC16.05■□□□□ 0.16
CLDN20P56880 TP73-AS1-210ENST00000637775 1455 ntBASIC16.05■□□□□ 0.16
CLDN20P56880 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 OR6D1P-202ENST00000641007 5290 ntBASIC16.05■□□□□ 0.16
CLDN20P56880 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN20P56880 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN20P56880 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN20P56880 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.05■□□□□ 0.16
CLDN20P56880 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms