Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDH8P55286 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH8P55286 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 MRPL3P1-201ENST00000400109 1033 ntBASIC18.66■□□□□ 0.58
CDH8P55286 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH8P55286 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDH8P55286 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH8P55286 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.66■□□□□ 0.58
CDH8P55286 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH8P55286 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH8P55286 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH8P55286 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH8P55286 AC148477.8-201ENST00000624298 468 ntBASIC18.66■□□□□ 0.58
CDH8P55286 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH8P55286 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH8P55286 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH8P55286 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH8P55286 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH8P55286 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 AC046185.3-201ENST00000623228 1824 ntBASIC18.65■□□□□ 0.58
CDH8P55286 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH8P55286 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.65■□□□□ 0.58
CDH8P55286 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDH8P55286 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 RNPS1P1-201ENST00000507437 918 ntBASIC18.65■□□□□ 0.58
CDH8P55286 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDH8P55286 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH8P55286 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH8P55286 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CDH8P55286 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH8P55286 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH8P55286 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CDH8P55286 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.64■□□□□ 0.58
CDH8P55286 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDH8P55286 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CDH8P55286 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDH8P55286 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH8P55286 AC106820.2-201ENST00000563775 3264 ntBASIC18.64■□□□□ 0.57
CDH8P55286 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDH8P55286 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH8P55286 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH8P55286 HNRNPDP1-201ENST00000439535 754 ntBASIC18.64■□□□□ 0.57
CDH8P55286 SCARNA2-201ENST00000458748 420 ntBASIC18.64■□□□□ 0.57
CDH8P55286 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH8P55286 MTDHP4-201ENST00000600287 670 ntBASIC18.64■□□□□ 0.57
CDH8P55286 AL139288.1-201ENST00000623748 933 ntBASIC18.64■□□□□ 0.57
CDH8P55286 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDH8P55286 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH8P55286 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDH8P55286 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH8P55286 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH8P55286 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH8P55286 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH8P55286 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.64■□□□□ 0.57
CDH8P55286 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH8P55286 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH8P55286 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CDH8P55286 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH8P55286 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH8P55286 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH8P55286 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH8P55286 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH8P55286 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH8P55286 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH8P55286 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH8P55286 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH8P55286 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDH8P55286 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH8P55286 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH8P55286 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH8P55286 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH8P55286 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms