Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.75■□□□□ 0.75
USP11P51784 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.75■□□□□ 0.75
USP11P51784 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
USP11P51784 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP11P51784 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.74■□□□□ 0.75
USP11P51784 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 AC097637.2-201ENST00000624096 1997 ntBASIC19.74■□□□□ 0.75
USP11P51784 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP11P51784 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 RPS2P1-201ENST00000434010 821 ntBASIC19.74■□□□□ 0.75
USP11P51784 RNA5SP419-201ENST00000515908 135 ntBASIC19.74■□□□□ 0.75
USP11P51784 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.74■□□□□ 0.75
USP11P51784 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.74■□□□□ 0.75
USP11P51784 OR7E14P-202ENST00000530490 1290 ntBASIC19.74■□□□□ 0.75
USP11P51784 AC139887.3-201ENST00000568585 713 ntBASIC19.74■□□□□ 0.75
USP11P51784 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.74■□□□□ 0.75
USP11P51784 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
USP11P51784 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
USP11P51784 NCF1C-201ENST00000438382 1427 ntBASIC19.74■□□□□ 0.75
USP11P51784 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
USP11P51784 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
USP11P51784 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.74■□□□□ 0.75
USP11P51784 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP11P51784 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.73■□□□□ 0.75
USP11P51784 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
USP11P51784 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.73■□□□□ 0.75
USP11P51784 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.73■□□□□ 0.75
USP11P51784 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.73■□□□□ 0.75
USP11P51784 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.73■□□□□ 0.75
USP11P51784 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USP11P51784 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP11P51784 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 LAGE3P1-201ENST00000425356 484 ntBASIC19.73■□□□□ 0.75
USP11P51784 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
USP11P51784 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.73■□□□□ 0.75
USP11P51784 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.73■□□□□ 0.75
USP11P51784 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.73■□□□□ 0.75
USP11P51784 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
USP11P51784 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP11P51784 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 HLA-A-201ENST00000376802 1334 ntBASIC19.73■□□□□ 0.75
USP11P51784 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.73■□□□□ 0.75
USP11P51784 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.73■□□□□ 0.75
USP11P51784 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.73■□□□□ 0.75
USP11P51784 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP11P51784 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.72■□□□□ 0.75
USP11P51784 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.72■□□□□ 0.75
USP11P51784 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP11P51784 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.72■□□□□ 0.75
USP11P51784 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
USP11P51784 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.72■□□□□ 0.75
USP11P51784 AL031284.1-201ENST00000419297 478 ntBASIC19.72■□□□□ 0.75
USP11P51784 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.72■□□□□ 0.75
USP11P51784 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.72■□□□□ 0.75
USP11P51784 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.72■□□□□ 0.75
USP11P51784 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.72■□□□□ 0.75
USP11P51784 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.72■□□□□ 0.75
USP11P51784 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
USP11P51784 FAM215A-202ENST00000632077 792 ntBASIC19.72■□□□□ 0.75
USP11P51784 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms