Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 AC007967.3-201ENST00000434308 558 ntBASIC16.99■□□□□ 0.31
HNF4AP41235 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 VENTXP7-201ENST00000475503 772 ntBASIC16.99■□□□□ 0.31
HNF4AP41235 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 MIR3180-1-201ENST00000580374 94 ntBASIC16.99■□□□□ 0.31
HNF4AP41235 MIR3180-3-201ENST00000584616 94 ntBASIC16.99■□□□□ 0.31
HNF4AP41235 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 AL138831.2-201ENST00000606564 490 ntBASIC16.99■□□□□ 0.31
HNF4AP41235 NPAP1P7-201ENST00000613027 823 ntBASIC16.99■□□□□ 0.31
HNF4AP41235 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.99■□□□□ 0.31
HNF4AP41235 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HNF4AP41235 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HNF4AP41235 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.99■□□□□ 0.31
HNF4AP41235 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HNF4AP41235 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.98■□□□□ 0.31
HNF4AP41235 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HNF4AP41235 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
HNF4AP41235 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.98■□□□□ 0.31
HNF4AP41235 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.98■□□□□ 0.31
HNF4AP41235 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HNF4AP41235 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 AC016396.2-201ENST00000562575 1417 ntBASIC16.98■□□□□ 0.31
HNF4AP41235 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.98■□□□□ 0.31
HNF4AP41235 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
HNF4AP41235 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.98■□□□□ 0.31
HNF4AP41235 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.98■□□□□ 0.31
HNF4AP41235 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.98■□□□□ 0.31
HNF4AP41235 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.98■□□□□ 0.31
HNF4AP41235 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.98■□□□□ 0.31
HNF4AP41235 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.98■□□□□ 0.31
HNF4AP41235 AP005901.3-202ENST00000581653 237 ntBASIC16.98■□□□□ 0.31
HNF4AP41235 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
HNF4AP41235 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.98■□□□□ 0.31
HNF4AP41235 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HNF4AP41235 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 AC233702.3-201ENST00000578656 1387 ntBASIC16.98■□□□□ 0.31
HNF4AP41235 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 CROCCP2-202ENST00000412962 2773 ntBASIC16.98■□□□□ 0.31
HNF4AP41235 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.98■□□□□ 0.31
HNF4AP41235 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HNF4AP41235 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HNF4AP41235 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HNF4AP41235 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.97■□□□□ 0.31
HNF4AP41235 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HNF4AP41235 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.97■□□□□ 0.31
HNF4AP41235 AC108860.2-201ENST00000562760 2183 ntBASIC16.97■□□□□ 0.31
HNF4AP41235 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HNF4AP41235 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.97■□□□□ 0.31
HNF4AP41235 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HNF4AP41235 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HNF4AP41235 MYCLP1-201ENST00000372451 1075 ntBASIC16.97■□□□□ 0.31
HNF4AP41235 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HNF4AP41235 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.97■□□□□ 0.31
HNF4AP41235 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.97■□□□□ 0.31
HNF4AP41235 ATP5G2P1-201ENST00000433580 426 ntBASIC16.97■□□□□ 0.31
HNF4AP41235 DRAXINP1-201ENST00000437611 948 ntBASIC16.97■□□□□ 0.31
HNF4AP41235 AC122714.2-201ENST00000502787 707 ntBASIC16.97■□□□□ 0.31
HNF4AP41235 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.97■□□□□ 0.31
HNF4AP41235 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.97■□□□□ 0.31
HNF4AP41235 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HNF4AP41235 AC005336.2-201ENST00000593183 939 ntBASIC16.97■□□□□ 0.31
HNF4AP41235 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HNF4AP41235 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
HNF4AP41235 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HNF4AP41235 AL139327.4-201ENST00000612362 153 ntBASIC16.97■□□□□ 0.31
HNF4AP41235 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HNF4AP41235 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms