Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKN1AP38936 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 PRYP5-201ENST00000451909 266 ntBASIC14.93□□□□□ -0.02
CDKN1AP38936 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.93□□□□□ -0.02
CDKN1AP38936 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.93□□□□□ -0.02
CDKN1AP38936 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKN1AP38936 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.93□□□□□ -0.02
CDKN1AP38936 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKN1AP38936 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKN1AP38936 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.93□□□□□ -0.02
CDKN1AP38936 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.93□□□□□ -0.02
CDKN1AP38936 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CDKN1AP38936 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDKN1AP38936 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDKN1AP38936 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CDKN1AP38936 KLF4P1-201ENST00000412782 1185 ntBASIC14.92□□□□□ -0.02
CDKN1AP38936 ELK2BP-201ENST00000415014 1224 ntBASIC14.92□□□□□ -0.02
CDKN1AP38936 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
CDKN1AP38936 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.92□□□□□ -0.02
CDKN1AP38936 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKN1AP38936 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKN1AP38936 AL589182.2-201ENST00000619332 1049 ntBASIC14.92□□□□□ -0.02
CDKN1AP38936 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDKN1AP38936 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 AC100803.2-201ENST00000562459 1963 ntBASIC14.92□□□□□ -0.02
CDKN1AP38936 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKN1AP38936 WIZP1-201ENST00000531444 2299 ntBASIC14.92□□□□□ -0.02
CDKN1AP38936 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.92□□□□□ -0.02
CDKN1AP38936 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.92□□□□□ -0.02
CDKN1AP38936 AC132938.5-201ENST00000624980 1813 ntBASIC14.92□□□□□ -0.02
CDKN1AP38936 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDKN1AP38936 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKN1AP38936 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.92□□□□□ -0.02
CDKN1AP38936 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.91□□□□□ -0.02
CDKN1AP38936 AC006504.4-201ENST00000592118 1568 ntBASIC14.91□□□□□ -0.02
CDKN1AP38936 AL049757.1-201ENST00000616842 1596 ntBASIC14.91□□□□□ -0.02
CDKN1AP38936 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 AL353593.2-201ENST00000602529 1483 ntBASIC14.91□□□□□ -0.02
CDKN1AP38936 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CDKN1AP38936 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKN1AP38936 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDKN1AP38936 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.91□□□□□ -0.02
CDKN1AP38936 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDKN1AP38936 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.91□□□□□ -0.02
CDKN1AP38936 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CDKN1AP38936 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.91□□□□□ -0.02
CDKN1AP38936 MIR4751-201ENST00000578027 74 ntBASIC14.91□□□□□ -0.02
CDKN1AP38936 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.91□□□□□ -0.02
CDKN1AP38936 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKN1AP38936 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKN1AP38936 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.91□□□□□ -0.02
CDKN1AP38936 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKN1AP38936 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms