Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSP1P33241 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSP1P33241 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LSP1P33241 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.59■□□□□ 0.41
LSP1P33241 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LSP1P33241 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.59■□□□□ 0.41
LSP1P33241 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.59■□□□□ 0.41
LSP1P33241 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.59■□□□□ 0.41
LSP1P33241 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 SLC25A1P3-201ENST00000395415 828 ntBASIC17.59■□□□□ 0.41
LSP1P33241 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.59■□□□□ 0.41
LSP1P33241 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.59■□□□□ 0.41
LSP1P33241 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.59■□□□□ 0.41
LSP1P33241 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.59■□□□□ 0.41
LSP1P33241 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.59■□□□□ 0.41
LSP1P33241 AC144831.1-201ENST00000573312 2656 ntBASIC17.59■□□□□ 0.41
LSP1P33241 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.59■□□□□ 0.41
LSP1P33241 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.59■□□□□ 0.41
LSP1P33241 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.59■□□□□ 0.41
LSP1P33241 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
LSP1P33241 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSP1P33241 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.59■□□□□ 0.41
LSP1P33241 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSP1P33241 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSP1P33241 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.58■□□□□ 0.41
LSP1P33241 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSP1P33241 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
LSP1P33241 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSP1P33241 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LSP1P33241 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSP1P33241 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSP1P33241 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
LSP1P33241 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.58■□□□□ 0.4
LSP1P33241 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
LSP1P33241 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 NIFKP9-201ENST00000419265 221 ntBASIC17.58■□□□□ 0.4
LSP1P33241 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LSP1P33241 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.58■□□□□ 0.4
LSP1P33241 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.58■□□□□ 0.4
LSP1P33241 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.58■□□□□ 0.4
LSP1P33241 AC009065.1-201ENST00000564055 1225 ntBASIC17.58■□□□□ 0.4
LSP1P33241 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.58■□□□□ 0.4
LSP1P33241 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.58■□□□□ 0.4
LSP1P33241 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.58■□□□□ 0.4
LSP1P33241 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.58■□□□□ 0.4
LSP1P33241 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
LSP1P33241 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.58■□□□□ 0.4
LSP1P33241 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LSP1P33241 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
LSP1P33241 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LSP1P33241 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
LSP1P33241 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LSP1P33241 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.57■□□□□ 0.4
LSP1P33241 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LSP1P33241 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.57■□□□□ 0.4
LSP1P33241 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.57■□□□□ 0.4
LSP1P33241 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LSP1P33241 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LSP1P33241 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.57■□□□□ 0.4
LSP1P33241 KRT18P23-201ENST00000435622 1283 ntBASIC17.57■□□□□ 0.4
LSP1P33241 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.57■□□□□ 0.4
LSP1P33241 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms