Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNA3P22001 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNA3P22001 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 AL135999.2-201ENST00000622438 1686 ntBASIC21.25■□□□□ 0.99
KCNA3P22001 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.25■□□□□ 0.99
KCNA3P22001 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KCNA3P22001 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.25■□□□□ 0.99
KCNA3P22001 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNA3P22001 TSSK5P-201ENST00000423978 907 ntBASIC21.25■□□□□ 0.99
KCNA3P22001 ATP5G2P4-201ENST00000442175 420 ntBASIC21.25■□□□□ 0.99
KCNA3P22001 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.25■□□□□ 0.99
KCNA3P22001 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.25■□□□□ 0.99
KCNA3P22001 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNA3P22001 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.25■□□□□ 0.99
KCNA3P22001 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNA3P22001 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.25■□□□□ 0.99
KCNA3P22001 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.25■□□□□ 0.99
KCNA3P22001 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 AC116407.2-201ENST00000613639 860 ntBASIC21.25■□□□□ 0.99
KCNA3P22001 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNA3P22001 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
KCNA3P22001 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNA3P22001 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNA3P22001 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNA3P22001 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNA3P22001 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNA3P22001 AL031598.1-201ENST00000561511 1773 ntBASIC21.24■□□□□ 0.99
KCNA3P22001 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNA3P22001 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNA3P22001 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNA3P22001 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNA3P22001 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNA3P22001 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNA3P22001 HMGA1P7-201ENST00000406908 502 ntBASIC21.24■□□□□ 0.99
KCNA3P22001 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.24■□□□□ 0.99
KCNA3P22001 IGHV3-62-201ENST00000520057 340 ntBASIC21.24■□□□□ 0.99
KCNA3P22001 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.24■□□□□ 0.99
KCNA3P22001 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.24■□□□□ 0.99
KCNA3P22001 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNA3P22001 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.24■□□□□ 0.99
KCNA3P22001 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNA3P22001 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNA3P22001 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNA3P22001 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
KCNA3P22001 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.23■□□□□ 0.99
KCNA3P22001 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 AC241585.1-201ENST00000433527 519 ntBASIC21.23■□□□□ 0.99
KCNA3P22001 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
KCNA3P22001 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.23■□□□□ 0.99
KCNA3P22001 AL161645.1-201ENST00000622716 1255 ntBASIC21.23■□□□□ 0.99
KCNA3P22001 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
KCNA3P22001 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNA3P22001 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNA3P22001 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.22■□□□□ 0.99
KCNA3P22001 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KCNA3P22001 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KCNA3P22001 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNA3P22001 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNA3P22001 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNA3P22001 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.22■□□□□ 0.99
KCNA3P22001 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.22■□□□□ 0.99
KCNA3P22001 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
KCNA3P22001 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.22■□□□□ 0.99
KCNA3P22001 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNA3P22001 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.22■□□□□ 0.99
KCNA3P22001 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.22■□□□□ 0.99
KCNA3P22001 ALG1L8P-201ENST00000533887 760 ntBASIC21.22■□□□□ 0.99
KCNA3P22001 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KCNA3P22001 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
KCNA3P22001 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.22■□□□□ 0.99
KCNA3P22001 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNA3P22001 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.21■□□□□ 0.99
KCNA3P22001 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms