Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.87■□□□□ 0.29
CAPN3P20807 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CAPN3P20807 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN3P20807 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN3P20807 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CAPN3P20807 AC116407.4-201ENST00000623319 1061 ntBASIC16.87■□□□□ 0.29
CAPN3P20807 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN3P20807 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CAPN3P20807 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN3P20807 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.87■□□□□ 0.29
CAPN3P20807 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN3P20807 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CAPN3P20807 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CAPN3P20807 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.86■□□□□ 0.29
CAPN3P20807 AC005104.2-201ENST00000427818 678 ntBASIC16.86■□□□□ 0.29
CAPN3P20807 AL671277.2-201ENST00000458060 996 ntBASIC16.86■□□□□ 0.29
CAPN3P20807 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.86■□□□□ 0.29
CAPN3P20807 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.86■□□□□ 0.29
CAPN3P20807 AC140113.3-201ENST00000605663 199 ntBASIC16.86■□□□□ 0.29
CAPN3P20807 AC011558.1-201ENST00000623459 338 ntBASIC16.86■□□□□ 0.29
CAPN3P20807 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CAPN3P20807 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.86■□□□□ 0.29
CAPN3P20807 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CAPN3P20807 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CAPN3P20807 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.86■□□□□ 0.29
CAPN3P20807 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CAPN3P20807 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN3P20807 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN3P20807 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN3P20807 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN3P20807 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN3P20807 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN3P20807 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN3P20807 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN3P20807 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN3P20807 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN3P20807 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN3P20807 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CAPN3P20807 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 AC005915.1-201ENST00000624912 2018 ntBASIC16.85■□□□□ 0.29
CAPN3P20807 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CAPN3P20807 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CAPN3P20807 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CAPN3P20807 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN3P20807 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN3P20807 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN3P20807 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms