Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2B1P20020 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP2B1P20020 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ATP2B1P20020 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATP2B1P20020 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATP2B1P20020 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP2B1P20020 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
ATP2B1P20020 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATP2B1P20020 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATP2B1P20020 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
ATP2B1P20020 AL645608.8-201ENST00000606034 2086 ntBASIC20.17■□□□□ 0.82
ATP2B1P20020 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.17■□□□□ 0.82
ATP2B1P20020 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP2B1P20020 CROCCP1-201ENST00000426910 5675 ntBASIC20.17■□□□□ 0.82
ATP2B1P20020 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.17■□□□□ 0.82
ATP2B1P20020 VENTXP7-201ENST00000475503 772 ntBASIC20.17■□□□□ 0.82
ATP2B1P20020 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP2B1P20020 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP2B1P20020 AL138831.2-201ENST00000606564 490 ntBASIC20.17■□□□□ 0.82
ATP2B1P20020 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.17■□□□□ 0.82
ATP2B1P20020 LINC01451-201ENST00000623792 534 ntBASIC20.17■□□□□ 0.82
ATP2B1P20020 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATP2B1P20020 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP2B1P20020 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
ATP2B1P20020 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP2B1P20020 CROCCP2-202ENST00000412962 2773 ntBASIC20.17■□□□□ 0.82
ATP2B1P20020 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ATP2B1P20020 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP2B1P20020 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
ATP2B1P20020 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ATP2B1P20020 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2B1P20020 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2B1P20020 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2B1P20020 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2B1P20020 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATP2B1P20020 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2B1P20020 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP2B1P20020 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.16■□□□□ 0.82
ATP2B1P20020 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
ATP2B1P20020 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 DRAXINP1-201ENST00000437611 948 ntBASIC20.16■□□□□ 0.82
ATP2B1P20020 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP2B1P20020 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 AC108860.2-201ENST00000562760 2183 ntBASIC20.16■□□□□ 0.82
ATP2B1P20020 AC097374.2-201ENST00000618617 1306 ntBASIC20.16■□□□□ 0.82
ATP2B1P20020 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ATP2B1P20020 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP2B1P20020 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP2B1P20020 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP2B1P20020 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2B1P20020 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2B1P20020 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ATP2B1P20020 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP2B1P20020 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2B1P20020 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
ATP2B1P20020 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2B1P20020 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP2B1P20020 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP2B1P20020 COX5BP2-201ENST00000392354 334 ntBASIC20.15■□□□□ 0.82
ATP2B1P20020 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2B1P20020 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP2B1P20020 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP2B1P20020 MINOS1P3-201ENST00000457048 203 ntBASIC20.15■□□□□ 0.82
ATP2B1P20020 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.15■□□□□ 0.82
ATP2B1P20020 AC074051.2-201ENST00000565115 352 ntBASIC20.15■□□□□ 0.82
ATP2B1P20020 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ATP2B1P20020 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2B1P20020 NPAP1P7-201ENST00000613027 823 ntBASIC20.15■□□□□ 0.82
ATP2B1P20020 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.15■□□□□ 0.82
ATP2B1P20020 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.15■□□□□ 0.82
ATP2B1P20020 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2B1P20020 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ATP2B1P20020 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ATP2B1P20020 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2B1P20020 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2B1P20020 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ATP2B1P20020 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms