Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATF3P18847 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATF3P18847 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ATF3P18847 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
ATF3P18847 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.81■■□□□ 1.4
ATF3P18847 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 AL135999.2-201ENST00000622438 1686 ntBASIC23.81■■□□□ 1.4
ATF3P18847 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
ATF3P18847 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.81■■□□□ 1.4
ATF3P18847 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
ATF3P18847 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC23.81■■□□□ 1.4
ATF3P18847 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC23.81■■□□□ 1.4
ATF3P18847 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
ATF3P18847 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.81■■□□□ 1.4
ATF3P18847 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.81■■□□□ 1.4
ATF3P18847 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.81■■□□□ 1.4
ATF3P18847 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.81■■□□□ 1.4
ATF3P18847 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ATF3P18847 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.8■■□□□ 1.4
ATF3P18847 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
ATF3P18847 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
ATF3P18847 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.8■■□□□ 1.4
ATF3P18847 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ATF3P18847 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC23.8■■□□□ 1.4
ATF3P18847 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC23.8■■□□□ 1.4
ATF3P18847 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.8■■□□□ 1.4
ATF3P18847 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC23.8■■□□□ 1.4
ATF3P18847 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC23.8■■□□□ 1.4
ATF3P18847 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC23.8■■□□□ 1.4
ATF3P18847 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.8■■□□□ 1.4
ATF3P18847 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATF3P18847 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.79■■□□□ 1.4
ATF3P18847 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
ATF3P18847 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 HMGA1P7-201ENST00000406908 502 ntBASIC23.79■■□□□ 1.4
ATF3P18847 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC23.79■■□□□ 1.4
ATF3P18847 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC23.79■■□□□ 1.4
ATF3P18847 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC23.79■■□□□ 1.4
ATF3P18847 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC23.79■■□□□ 1.4
ATF3P18847 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC23.79■■□□□ 1.4
ATF3P18847 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.79■■□□□ 1.4
ATF3P18847 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.79■■□□□ 1.4
ATF3P18847 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.79■■□□□ 1.4
ATF3P18847 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.79■■□□□ 1.4
ATF3P18847 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATF3P18847 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ATF3P18847 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC23.78■■□□□ 1.4
ATF3P18847 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 U91328.1-201ENST00000437528 223 ntBASIC23.78■■□□□ 1.4
ATF3P18847 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.78■■□□□ 1.4
ATF3P18847 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC23.78■■□□□ 1.4
ATF3P18847 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC23.78■■□□□ 1.4
ATF3P18847 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC23.78■■□□□ 1.4
ATF3P18847 AL009183.1-201ENST00000603760 355 ntBASIC23.78■■□□□ 1.4
ATF3P18847 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.78■■□□□ 1.4
ATF3P18847 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC23.78■■□□□ 1.4
ATF3P18847 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
ATF3P18847 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATF3P18847 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC23.78■■□□□ 1.4
ATF3P18847 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ATF3P18847 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ATF3P18847 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms