Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMPD1P17405 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.34■□□□□ 0.69
SMPD1P17405 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMPD1P17405 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMPD1P17405 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.34■□□□□ 0.69
SMPD1P17405 AC087163.2-201ENST00000457299 853 ntBASIC19.34■□□□□ 0.69
SMPD1P17405 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.34■□□□□ 0.69
SMPD1P17405 MIR3197-201ENST00000582241 73 ntBASIC19.34■□□□□ 0.69
SMPD1P17405 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 AC087289.5-201ENST00000586076 3175 ntBASIC19.34■□□□□ 0.69
SMPD1P17405 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SMPD1P17405 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
SMPD1P17405 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
SMPD1P17405 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.34■□□□□ 0.69
SMPD1P17405 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMPD1P17405 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMPD1P17405 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMPD1P17405 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.33■□□□□ 0.69
SMPD1P17405 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SMPD1P17405 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMPD1P17405 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SMPD1P17405 AL121761.2-201ENST00000598007 1648 ntBASIC19.33■□□□□ 0.69
SMPD1P17405 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMPD1P17405 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMPD1P17405 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMPD1P17405 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SMPD1P17405 MIR770-201ENST00000390219 98 ntBASIC19.33■□□□□ 0.68
SMPD1P17405 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.33■□□□□ 0.68
SMPD1P17405 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.33■□□□□ 0.68
SMPD1P17405 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
SMPD1P17405 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SMPD1P17405 AC022145.2-201ENST00000598203 171 ntBASIC19.33■□□□□ 0.68
SMPD1P17405 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMPD1P17405 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.33■□□□□ 0.68
SMPD1P17405 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
SMPD1P17405 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMPD1P17405 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.33■□□□□ 0.68
SMPD1P17405 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SMPD1P17405 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.33■□□□□ 0.68
SMPD1P17405 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMPD1P17405 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMPD1P17405 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SMPD1P17405 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SMPD1P17405 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SMPD1P17405 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SMPD1P17405 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.32■□□□□ 0.68
SMPD1P17405 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.32■□□□□ 0.68
SMPD1P17405 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SMPD1P17405 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.32■□□□□ 0.68
SMPD1P17405 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.32■□□□□ 0.68
SMPD1P17405 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.32■□□□□ 0.68
SMPD1P17405 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.32■□□□□ 0.68
SMPD1P17405 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.32■□□□□ 0.68
SMPD1P17405 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.32■□□□□ 0.68
SMPD1P17405 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SMPD1P17405 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.32■□□□□ 0.68
SMPD1P17405 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SMPD1P17405 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD1P17405 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SMPD1P17405 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.31■□□□□ 0.68
SMPD1P17405 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.31■□□□□ 0.68
SMPD1P17405 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.31■□□□□ 0.68
SMPD1P17405 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMPD1P17405 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMPD1P17405 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.31■□□□□ 0.68
SMPD1P17405 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD1P17405 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.31■□□□□ 0.68
SMPD1P17405 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SMPD1P17405 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.31■□□□□ 0.68
SMPD1P17405 AC004449.1-201ENST00000564240 433 ntBASIC19.31■□□□□ 0.68
SMPD1P17405 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.31■□□□□ 0.68
SMPD1P17405 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SMPD1P17405 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms