Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HIST1H1DP16402 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1DP16402 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1DP16402 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST1H1DP16402 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 AC004263.2-201ENST00000617183 678 ntBASIC14.86□□□□□ -0.03
HIST1H1DP16402 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 KRT17P2-201ENST00000300992 1314 ntBASIC14.86□□□□□ -0.03
HIST1H1DP16402 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H1DP16402 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1DP16402 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 ECEL1P2-202ENST00000465689 757 ntBASIC14.85□□□□□ -0.03
HIST1H1DP16402 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 AC002558.1-201ENST00000488906 803 ntBASIC14.85□□□□□ -0.03
HIST1H1DP16402 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 AC093525.9-201ENST00000624961 1746 ntBASIC14.85□□□□□ -0.03
HIST1H1DP16402 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H1DP16402 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1DP16402 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1DP16402 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1DP16402 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H1DP16402 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H1DP16402 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1DP16402 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1DP16402 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H1DP16402 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1DP16402 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1DP16402 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H1DP16402 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.84□□□□□ -0.03
HIST1H1DP16402 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1DP16402 AL603756.1-201ENST00000606511 2163 ntBASIC14.84□□□□□ -0.03
HIST1H1DP16402 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H1DP16402 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H1DP16402 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1DP16402 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H1DP16402 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms