Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.57■□□□□ 0.24
NCK1P16333 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.57■□□□□ 0.24
NCK1P16333 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.57■□□□□ 0.24
NCK1P16333 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 MIR1238-201ENST00000408483 83 ntBASIC16.57■□□□□ 0.24
NCK1P16333 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.57■□□□□ 0.24
NCK1P16333 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 KRT18P65-201ENST00000439811 1286 ntBASIC16.57■□□□□ 0.24
NCK1P16333 UBE2SP1-201ENST00000450587 669 ntBASIC16.57■□□□□ 0.24
NCK1P16333 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.57■□□□□ 0.24
NCK1P16333 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
NCK1P16333 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.57■□□□□ 0.24
NCK1P16333 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.57■□□□□ 0.24
NCK1P16333 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.57■□□□□ 0.24
NCK1P16333 AC092865.7-201ENST00000641832 219 ntBASIC16.57■□□□□ 0.24
NCK1P16333 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCK1P16333 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NCK1P16333 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCK1P16333 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NCK1P16333 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.56■□□□□ 0.24
NCK1P16333 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.56■□□□□ 0.24
NCK1P16333 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 LINC01311-201ENST00000565162 1445 ntBASIC16.56■□□□□ 0.24
NCK1P16333 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NCK1P16333 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.56■□□□□ 0.24
NCK1P16333 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.56■□□□□ 0.24
NCK1P16333 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.56■□□□□ 0.24
NCK1P16333 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.56■□□□□ 0.24
NCK1P16333 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.56■□□□□ 0.24
NCK1P16333 Z99916.2-201ENST00000604037 246 ntBASIC16.56■□□□□ 0.24
NCK1P16333 AC010653.2-201ENST00000623505 997 ntBASIC16.56■□□□□ 0.24
NCK1P16333 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.56■□□□□ 0.24
NCK1P16333 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NCK1P16333 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
NCK1P16333 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NCK1P16333 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCK1P16333 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NCK1P16333 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.55■□□□□ 0.24
NCK1P16333 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.55■□□□□ 0.24
NCK1P16333 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.55■□□□□ 0.24
NCK1P16333 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.55■□□□□ 0.24
NCK1P16333 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.55■□□□□ 0.24
NCK1P16333 TSPY20P-201ENST00000450910 630 ntBASIC16.55■□□□□ 0.24
NCK1P16333 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.55■□□□□ 0.24
NCK1P16333 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.55■□□□□ 0.24
NCK1P16333 AC113404.2-201ENST00000507884 177 ntBASIC16.55■□□□□ 0.24
NCK1P16333 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.55■□□□□ 0.24
NCK1P16333 C2orf69P3-201ENST00000565542 1120 ntBASIC16.55■□□□□ 0.24
NCK1P16333 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.55■□□□□ 0.24
NCK1P16333 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.55■□□□□ 0.24
NCK1P16333 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCK1P16333 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NCK1P16333 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms