Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRFP11831 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRFP11831 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRFP11831 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.56■□□□□ 0.4
SRFP11831 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.56■□□□□ 0.4
SRFP11831 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.56■□□□□ 0.4
SRFP11831 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.56■□□□□ 0.4
SRFP11831 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.56■□□□□ 0.4
SRFP11831 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.56■□□□□ 0.4
SRFP11831 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.56■□□□□ 0.4
SRFP11831 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.56■□□□□ 0.4
SRFP11831 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.56■□□□□ 0.4
SRFP11831 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.56■□□□□ 0.4
SRFP11831 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SRFP11831 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 KRT8P23-201ENST00000560090 1207 ntBASIC17.56■□□□□ 0.4
SRFP11831 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.56■□□□□ 0.4
SRFP11831 MIR4515-201ENST00000584082 81 ntBASIC17.56■□□□□ 0.4
SRFP11831 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.56■□□□□ 0.4
SRFP11831 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.56■□□□□ 0.4
SRFP11831 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.56■□□□□ 0.4
SRFP11831 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.56■□□□□ 0.4
SRFP11831 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.56■□□□□ 0.4
SRFP11831 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRFP11831 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.55■□□□□ 0.4
SRFP11831 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
SRFP11831 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.55■□□□□ 0.4
SRFP11831 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.55■□□□□ 0.4
SRFP11831 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.55■□□□□ 0.4
SRFP11831 AC107918.2-201ENST00000530817 355 ntBASIC17.55■□□□□ 0.4
SRFP11831 AC026150.2-201ENST00000564693 1156 ntBASIC17.55■□□□□ 0.4
SRFP11831 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.55■□□□□ 0.4
SRFP11831 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.55■□□□□ 0.4
SRFP11831 AL158211.3-201ENST00000607385 239 ntBASIC17.55■□□□□ 0.4
SRFP11831 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.55■□□□□ 0.4
SRFP11831 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.55■□□□□ 0.4
SRFP11831 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.55■□□□□ 0.4
SRFP11831 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SRFP11831 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.55■□□□□ 0.4
SRFP11831 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SRFP11831 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SRFP11831 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SRFP11831 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.55■□□□□ 0.4
SRFP11831 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SRFP11831 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SRFP11831 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SRFP11831 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFP11831 AC008677.1-201ENST00000519230 1561 ntBASIC17.54■□□□□ 0.4
SRFP11831 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SRFP11831 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFP11831 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SRFP11831 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.54■□□□□ 0.4
SRFP11831 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFP11831 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.54■□□□□ 0.4
SRFP11831 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SRFP11831 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.54■□□□□ 0.4
SRFP11831 AL512638.1-201ENST00000457493 794 ntBASIC17.54■□□□□ 0.4
SRFP11831 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.54■□□□□ 0.4
SRFP11831 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.54■□□□□ 0.4
SRFP11831 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFP11831 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.54■□□□□ 0.4
SRFP11831 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.54■□□□□ 0.4
SRFP11831 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFP11831 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SRFP11831 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SRFP11831 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms