Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFD1P11586 AC084018.2-201ENST00000613093 2607 ntBASIC17.34■□□□□ 0.37
MTHFD1P11586 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFD1P11586 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MTHFD1P11586 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.33■□□□□ 0.37
MTHFD1P11586 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
MTHFD1P11586 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.33■□□□□ 0.37
MTHFD1P11586 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.33■□□□□ 0.37
MTHFD1P11586 OR6D1P-202ENST00000641007 5290 ntBASIC17.33■□□□□ 0.37
MTHFD1P11586 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.33■□□□□ 0.37
MTHFD1P11586 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MTHFD1P11586 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.33■□□□□ 0.37
MTHFD1P11586 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.33■□□□□ 0.37
MTHFD1P11586 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.33■□□□□ 0.36
MTHFD1P11586 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
MTHFD1P11586 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.33■□□□□ 0.36
MTHFD1P11586 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.33■□□□□ 0.36
MTHFD1P11586 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.33■□□□□ 0.36
MTHFD1P11586 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.33■□□□□ 0.36
MTHFD1P11586 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.33■□□□□ 0.36
MTHFD1P11586 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.33■□□□□ 0.36
MTHFD1P11586 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.33■□□□□ 0.36
MTHFD1P11586 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.33■□□□□ 0.36
MTHFD1P11586 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 AL121894.2-201ENST00000602977 491 ntBASIC17.33■□□□□ 0.36
MTHFD1P11586 AC116407.2-201ENST00000613639 860 ntBASIC17.33■□□□□ 0.36
MTHFD1P11586 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.33■□□□□ 0.36
MTHFD1P11586 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.33■□□□□ 0.36
MTHFD1P11586 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.33■□□□□ 0.36
MTHFD1P11586 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 INTS4P1-201ENST00000438455 1935 ntBASIC17.33■□□□□ 0.36
MTHFD1P11586 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
MTHFD1P11586 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MTHFD1P11586 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.32■□□□□ 0.36
MTHFD1P11586 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.32■□□□□ 0.36
MTHFD1P11586 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.32■□□□□ 0.36
MTHFD1P11586 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 AC004870.1-201ENST00000315132 882 ntBASIC17.32■□□□□ 0.36
MTHFD1P11586 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.32■□□□□ 0.36
MTHFD1P11586 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 FAM220CP-201ENST00000395253 831 ntBASIC17.32■□□□□ 0.36
MTHFD1P11586 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.32■□□□□ 0.36
MTHFD1P11586 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.32■□□□□ 0.36
MTHFD1P11586 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.32■□□□□ 0.36
MTHFD1P11586 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.32■□□□□ 0.36
MTHFD1P11586 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MTHFD1P11586 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MTHFD1P11586 AC010460.3-201ENST00000511359 1579 ntBASIC17.32■□□□□ 0.36
MTHFD1P11586 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
MTHFD1P11586 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MTHFD1P11586 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MTHFD1P11586 KRT18P55-202ENST00000578578 1546 ntBASIC17.31■□□□□ 0.36
MTHFD1P11586 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MTHFD1P11586 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MTHFD1P11586 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MTHFD1P11586 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MTHFD1P11586 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MTHFD1P11586 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms