Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
OPN1SWP03999 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 AC139887.4-201ENST00000607877 719 ntBASIC16.37■□□□□ 0.21
OPN1SWP03999 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
OPN1SWP03999 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
OPN1SWP03999 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.37■□□□□ 0.21
OPN1SWP03999 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.37■□□□□ 0.21
OPN1SWP03999 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPN1SWP03999 AL353692.3-201ENST00000407031 1396 ntBASIC16.37■□□□□ 0.21
OPN1SWP03999 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.37■□□□□ 0.21
OPN1SWP03999 AC079328.2-201ENST00000561241 3354 ntBASIC16.37■□□□□ 0.21
OPN1SWP03999 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.36■□□□□ 0.21
OPN1SWP03999 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
OPN1SWP03999 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.36■□□□□ 0.21
OPN1SWP03999 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
OPN1SWP03999 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.36■□□□□ 0.21
OPN1SWP03999 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
OPN1SWP03999 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 STARP1-201ENST00000397973 869 ntBASIC16.36■□□□□ 0.21
OPN1SWP03999 FAM8A6P-201ENST00000407496 1135 ntBASIC16.36■□□□□ 0.21
OPN1SWP03999 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 AC005104.2-201ENST00000427818 678 ntBASIC16.36■□□□□ 0.21
OPN1SWP03999 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
OPN1SWP03999 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.36■□□□□ 0.21
OPN1SWP03999 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.36■□□□□ 0.21
OPN1SWP03999 ZNF444P1-201ENST00000559497 298 ntBASIC16.36■□□□□ 0.21
OPN1SWP03999 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.36■□□□□ 0.21
OPN1SWP03999 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.36■□□□□ 0.21
OPN1SWP03999 AL031432.5-201ENST00000641059 760 ntBASIC16.36■□□□□ 0.21
OPN1SWP03999 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
OPN1SWP03999 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
OPN1SWP03999 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.36■□□□□ 0.21
OPN1SWP03999 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.36■□□□□ 0.21
OPN1SWP03999 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
OPN1SWP03999 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 AGGF1P2-201ENST00000426656 2106 ntBASIC16.36■□□□□ 0.21
OPN1SWP03999 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
OPN1SWP03999 AC016396.2-201ENST00000562575 1417 ntBASIC16.36■□□□□ 0.21
OPN1SWP03999 LINC01311-201ENST00000565162 1445 ntBASIC16.36■□□□□ 0.21
OPN1SWP03999 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPN1SWP03999 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.36■□□□□ 0.21
OPN1SWP03999 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OPN1SWP03999 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
OPN1SWP03999 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.35■□□□□ 0.21
OPN1SWP03999 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.35■□□□□ 0.21
OPN1SWP03999 AL118508.1-201ENST00000613502 2345 ntBASIC16.35■□□□□ 0.21
OPN1SWP03999 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.35■□□□□ 0.21
OPN1SWP03999 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.35■□□□□ 0.21
OPN1SWP03999 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 MTCL1P1-201ENST00000446207 792 ntBASIC16.35■□□□□ 0.21
OPN1SWP03999 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.35■□□□□ 0.21
OPN1SWP03999 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.35■□□□□ 0.21
OPN1SWP03999 YBX1P2-201ENST00000489612 999 ntBASIC16.35■□□□□ 0.21
OPN1SWP03999 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
OPN1SWP03999 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.35■□□□□ 0.21
OPN1SWP03999 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.35■□□□□ 0.21
OPN1SWP03999 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.35■□□□□ 0.21
OPN1SWP03999 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
OPN1SWP03999 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.35■□□□□ 0.21
OPN1SWP03999 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OPN1SWP03999 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
OPN1SWP03999 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms