Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.6■□□□□ 0.41
VAPBO95292 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.6■□□□□ 0.41
VAPBO95292 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VAPBO95292 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.6■□□□□ 0.41
VAPBO95292 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.6■□□□□ 0.41
VAPBO95292 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.6■□□□□ 0.41
VAPBO95292 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.6■□□□□ 0.41
VAPBO95292 AL121672.3-201ENST00000608644 468 ntBASIC17.6■□□□□ 0.41
VAPBO95292 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.6■□□□□ 0.41
VAPBO95292 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VAPBO95292 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 AC016734.2-201ENST00000624325 1377 ntBASIC17.6■□□□□ 0.41
VAPBO95292 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.6■□□□□ 0.41
VAPBO95292 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VAPBO95292 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.6■□□□□ 0.41
VAPBO95292 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.6■□□□□ 0.41
VAPBO95292 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.6■□□□□ 0.41
VAPBO95292 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.6■□□□□ 0.41
VAPBO95292 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
VAPBO95292 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
VAPBO95292 AC022211.2-201ENST00000585075 2527 ntBASIC17.6■□□□□ 0.41
VAPBO95292 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.6■□□□□ 0.41
VAPBO95292 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VAPBO95292 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VAPBO95292 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VAPBO95292 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.59■□□□□ 0.41
VAPBO95292 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.59■□□□□ 0.41
VAPBO95292 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.59■□□□□ 0.41
VAPBO95292 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.59■□□□□ 0.41
VAPBO95292 CHCHD2P8-201ENST00000429873 447 ntBASIC17.59■□□□□ 0.41
VAPBO95292 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 AC087388.1-201ENST00000571370 1112 ntBASIC17.59■□□□□ 0.41
VAPBO95292 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.59■□□□□ 0.41
VAPBO95292 AL590326.2-201ENST00000625139 305 ntBASIC17.59■□□□□ 0.41
VAPBO95292 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.59■□□□□ 0.41
VAPBO95292 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.59■□□□□ 0.41
VAPBO95292 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
VAPBO95292 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPBO95292 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VAPBO95292 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VAPBO95292 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VAPBO95292 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.58■□□□□ 0.41
VAPBO95292 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.58■□□□□ 0.41
VAPBO95292 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
VAPBO95292 AC016396.2-201ENST00000562575 1417 ntBASIC17.58■□□□□ 0.41
VAPBO95292 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.58■□□□□ 0.4
VAPBO95292 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 AD000864.1-201ENST00000624076 2295 ntBASIC17.58■□□□□ 0.4
VAPBO95292 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.58■□□□□ 0.4
VAPBO95292 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
VAPBO95292 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.58■□□□□ 0.4
VAPBO95292 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VAPBO95292 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.58■□□□□ 0.4
VAPBO95292 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.58■□□□□ 0.4
VAPBO95292 AC109462.3-201ENST00000573934 613 ntBASIC17.58■□□□□ 0.4
VAPBO95292 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.58■□□□□ 0.4
VAPBO95292 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
VAPBO95292 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
VAPBO95292 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
VAPBO95292 AC116407.4-201ENST00000623319 1061 ntBASIC17.58■□□□□ 0.4
VAPBO95292 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.58■□□□□ 0.4
VAPBO95292 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
VAPBO95292 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms