Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC7.71□□□□□ -1.18
USH2AO75445 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC7.71□□□□□ -1.18
USH2AO75445 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC7.71□□□□□ -1.18
USH2AO75445 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC7.71□□□□□ -1.18
USH2AO75445 EMC4-209ENST00000559421 497 ntTSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC7.71□□□□□ -1.18
USH2AO75445 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
USH2AO75445 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 HMGA1P7-201ENST00000406908 502 ntBASIC7.71□□□□□ -1.18
USH2AO75445 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC7.71□□□□□ -1.18
USH2AO75445 AL138918.1-201ENST00000568306 659 ntBASIC7.71□□□□□ -1.18
USH2AO75445 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC7.71□□□□□ -1.18
USH2AO75445 PRR29-204ENST00000577953 565 ntTSL 4 BASIC7.71□□□□□ -1.18
USH2AO75445 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC7.71□□□□□ -1.18
USH2AO75445 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
USH2AO75445 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
USH2AO75445 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC7.71□□□□□ -1.18
USH2AO75445 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
USH2AO75445 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC7.71□□□□□ -1.18
USH2AO75445 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 AC093677.2-201ENST00000600169 1863 ntBASIC7.7□□□□□ -1.18
USH2AO75445 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
USH2AO75445 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC7.7□□□□□ -1.18
USH2AO75445 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 IGHV3-62-201ENST00000520057 340 ntBASIC7.7□□□□□ -1.18
USH2AO75445 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC7.7□□□□□ -1.18
USH2AO75445 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 TECR-220ENST00000600083 1204 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
USH2AO75445 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
USH2AO75445 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC7.7□□□□□ -1.18
USH2AO75445 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
USH2AO75445 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
USH2AO75445 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 WASH4P-201ENST00000564273 1246 ntBASIC7.7□□□□□ -1.18
USH2AO75445 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC7.7□□□□□ -1.18
USH2AO75445 AC103810.3-201ENST00000583567 96 ntBASIC7.7□□□□□ -1.18
USH2AO75445 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 AC243960.2-201ENST00000600996 747 ntBASIC7.7□□□□□ -1.18
USH2AO75445 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 RPSAP52-203ENST00000622976 1023 ntBASIC7.7□□□□□ -1.18
USH2AO75445 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 HARS-201ENST00000307633 1780 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
USH2AO75445 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
USH2AO75445 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC7.7□□□□□ -1.18
USH2AO75445 ADM-207ENST00000530439 1839 ntTSL 2 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms